Toru Ishizuka's Resource

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Toru Ishizuka's Resource

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Catalog #	Name of clone	Running title	Publication
RDB16748	pCAGGS-ChRGR-Venus	Expression vector of organelle optogenetics channelrhodopsin.	Asano, T., Organelle Optogenetics: Direct Manipulation of Intracellular Ca2+ Dynamics by Light. Front. Neurosci. 12: 561 (2018). PMID 30174581. (original).
RDB16750	pCAGGS-ChRGR(ER)-Venus	Expression vector of organelle optogenetics channelrhodopsin.	Asano, T., Organelle Optogenetics: Direct Manipulation of Intracellular Ca2+ Dynamics by Light. Front. Neurosci. 12: 561 (2018). PMID 30174581. (original).
RDB16769	pCMV-chop1-Venus	Mammalian expression vector encoding channelopsin-1 (ChR1) from Chlamydomonas reinhardtii.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16770	pCMV-chop2-Venus	Mammalian expression vector encoding channelopsin-2 (ChR2) from Chlamydomonas reinhardtii.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16771	pCMV-chopFR-Venus	Mammalian expression vector encoding a chimeric channelopsin (channelopsin/fast-receiver, chopFR) between chop1 and chop2 from Chlamydomonas reinhardtii.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16772	pCMV-chopWR-Venus	Mammalian expression vector encoding a chimeric channelopsin (channelopsin/wide-receiver, chopWR) between chop1 and chop2 from Chlamydomonas reinhardtii.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16773	pCMV-ChRFR-Venus	Mammalian expression vector encoding a mammalian codon-optimized chopFR.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16774	pCMV-ChRWR-Venus	Mammalian expression vector encoding a mammalian codon-optimized chopWR.	Wang, H., Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas. J. Biol. Chem. 284 (9): 5685-5696 (2009). PMID 19103605. (original).
RDB16775	pCMV-chopGR-Venus	Mammalian expression vector encoding a chimeric channelopsin (channelopsin/green-receiver, chopGR) between chop1 and chop2 from Chlamydomonas reinhardtii.	Wen, L., Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin. PLoS One 5 (9): e12893 (2010). PMID 20886118. (original).
RDB16776	pCMV-ChRGR-Venus	Mammalian expression vector encoding a mammalian codon-optimized chopGR.	Wen, L., Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin. PLoS One 5 (9): e12893 (2010). PMID 20886118. (original).
RDB16777	pCMV-KR2-3.0-EYFP	Mammalian expression vector encoding a light-driven sodiun ion pump from Krokinobacter eikastus (KR2) fused with a membrane targeting signal (TS), eYFP, and an ER export signal (ERex).	Kato, H.E., Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump. Nature 521 (7550): 48-53 (2015). PMID 25849775. (original).
RDB16778	pCaMKIIa-KR2-3.0-EYFP-WPRE	Mammalian expression vector encoding a light-driven sodiun ion pump from Krokinobacter eikastus (KR2) fused with a membrane targeting signal (TS), eYFP, and an ER export signal (ERex).	Kato, H.E., Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump. Nature 521 (7550): 48-53 (2015). PMID 25849775. (original).
RDB16779	pCMV-IaNaR-3.0-EYFP	Mammalian expression vector encoding a light-driven sodiun ion pump from Indibacter alkaliphilus (IaNaR) fused with a membrane targeting signal (TS), eYFP, and an ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16780	pCMV-I1K6NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16781	pCMV-I2K5NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16782	pCMV-I3K4NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16783	pCMV-I4K3NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16784	pCMV-I5K2NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16785	pCMV-I6K1NaR-3.0-EYFP	Mammalian expression vector encoding a chimeric NaR between IaNaR and KR2 fused with a membrane targeting signal (TS), eYFP, and ER export signal (ERex).	Hoque, M.R., A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer. PLoS One 11 (11): e0166820 (2016). PMID 27861619. (original).
RDB16786	pCMV-MvChR1-Venus	Mammalian expression vector encoding Met1-Arg323 of channelrhodopsin 1 from Mesostigma viride (MvChR1).	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16787	pCMV-eMvChR1#1-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#1).	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16788	pCMV-eMvChR1#2-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#2).	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16789	pCMV-eMvChR1#2(A97D)-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#2). A97D mutation was introduced.	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16790	pCMV-eMvChR1#2(A97E)-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#2). A97E mutation was introduced.	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16791	pCMV-eMvChR1#2(A97Q)-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#2). A97Q mutation was introduced.	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16792	pCMV-eMvChR1#2(A97R)-Venus	Mammalian expression vector encoding an N-terminal variant of MvChR1 (eMvChR1#2). A97R mutation was introduced.	Watanabe, S., The regulatory mechanism of ion permeation through a channelrhodopsin derived from Mesostigma viride (MvChR1). Photochem. Photobiol. Sci. 15 (3): 365-374 (2016). PMID 26853505. (original).
RDB16793	pCMV-C1V1-Venus	Mammalian expression vector encoding a chimeric channelrhodopsin (C1V1).	Hososhima, S., Near-infrared (NIR) up-conversion optogenetics. Sci. Rep. 5: 16533 (2015). PMID 26552717. (original).
RDB16794	pCMV-PsChR-Venus	Mammalian expression vector encoding a channelrhodopsin from Platymonas (Tetraselmis) subcordiformis (PsChR).	Hososhima, S., Near-infrared (NIR) up-conversion optogenetics. Sci. Rep. 5: 16533 (2015). PMID 26552717. (original).
RDB16795	pCaMKIIa-C1V1-Venus	Mammalian expression vector encoding a chimeric channelrhodopsin (C1V1).	Hososhima, S., Near-infrared (NIR) up-conversion optogenetics. Sci. Rep. 5: 16533 (2015). PMID 26552717. (original).
RDB16796	pCaMKIIa-PsChR-Venus	Mammalian expression vector encoding a channelrhodopsin from Platymonas (Tetraselmis) subcordiformis (PsChR).	Hososhima, S., Near-infrared (NIR) up-conversion optogenetics. Sci. Rep. 5: 16533 (2015). PMID 26552717. (original).
RDB16797	pAcGFP-NCre	Mammalian expression vector encoding Cre recombinase tagged with AcGFP1.	Igarashi, H., A Novel Reporter Rat Strain That Conditionally Expresses the Bright Red Fluorescent Protein tdTomato. PLoS One. 2016 May 19;11(5):e0155687 (2016). PMID 27195805. (original).

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2023.05.01

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