Marker of cholesterol-rich domain of the plasma membrane. Bacterial expression plasmid of His6-EGFP-tagged perfringolysin theta toxin D4 of C. perfringens.
|
Other clones in our bank
External Database Clostridium perfringens pfoA Aequorea victoria GFP Reference sequence |
Sequence (full) ![]() |
RDB13961zzt01.seq compiled by us |
---|
Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
Terms and conditions for distribution | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested. (Shimada, Y., Eur J Biochem. 269 (24): 6195-6203, 2002.) |
---|---|
Ordering | Please visit Information of Request for Distribution.[link] For for-profit-research purpose, please contact us. Order form [Credit Card Payment ![]() ![]() Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word ![]() |
提供条件 | 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (Shimada, Y., Eur J Biochem. 269 (24): 6195-6203, 2002.)。 |
---|---|
提供依頼 | 手続きの詳細は、「提供申込みについて[link]」をご覧ください。営利目的利用についてはお問い合わせください。 提供依頼書 [Word ![]() 提供同意書 (MTA、非営利機関による非営利学術研究用)[Word ![]() |
Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
---|---|---|---|
RDB13961 | pET28/His6-EGFP-D4 | DNA solution |
Materials & Methods section:
The pET28/His6-EGFP-D4 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB13961). |
Reference section:
Further references such as user reports and related articles (go to bottom)
Featured content
Featured content | Visualization of Organelles (English text) |
---|---|
Featured content | Sphingolipid signaling pathway (English text) |
RIKEN BRC has sequenced portions of this material for quality test.
Please review the QC test results indicated by icon as well as clone information before placing your order.
Test sheet | RDB13961_A6Btp1-4.pdf ![]() |
---|
Nucleotide sequence of a portion of this resource (if available).
Primer: pBR322_BamHI_R (Pr0065) Region: lacO,6xHis,thrombin site,insert 5'(EGFP 5') Sequence file: RDB13961_A6Btd.seq ![]() |
---|
>D03144A4_A6Bt_1_pBR 322 BamHI R_B04_04.ab1 1 NNNNNNNNNN NNNNNTNNNN ATAGGNNNNN TGTGAGCGGA NAACAATTCC CCTCTAGAAA 61 TAATTTTGTT TAACTTTAAG AAGGAGATAT ACCATGGGCA GCAGCCATCA TCATCATCAT 121 CACAGCAGCG GCCTGGTGCC GCGCGGCAGC CATATGGCTA GAGTGAGCAA GGGCGAGGAG 181 CTGTTCACCG GGGTGGTGCC CATCCTGGTC GAGCTGGACG GCGACGTAAA CGGCCACAAG 241 TTCAGCGTGT CCGGCGAGGG CGAGGGCGAT GCCACCTACG GCAAGCTGAC CCTGAAGTTC 301 ATCTGCACCA CCGGCAAGCT GCCCGTGCCC TGGCCCACCC TCGTGACCAC CCTGACCTAC 361 GGCGTGCAGT GCTTCAGCCG CTACCCCGAC CACATGAAGC AGCACGACTT CTTCAAGTCC 421 GCCATGCCCG AAGGCTACGT CCAGGAGCGC ACCATCTTCT TCAAGGACGA CGGCAACTAC 481 AAGACCCGCG CCGAGGTGAA GTTCGAGGGC GACACCCTGG TGAACCGCAT CGAGCTGAAG 541 GGCATCGACT TCAAGGAGGA CGGCAACATC CTGGGGCACA AGCTGGAGTA CAACTACAAC 601 AGCCACAACG TCTATATCAT GGCCGACAAG CAGAAGAACG GCATCAAGGT GAACTTCAAG 661 ATCCGCCACA ACATCGAGGA CGGCAGCGTG CAGCTCGCCG ACCACTACCA GCAGAACACC 721 CCCATCGGCG ACNGCCCCGT GCTGCTGCCC GACAACCACT ACCTGANCAC CCAGTCCGCC 781 CTGAGCAAAG ACCCCAACGA GAAGCGCGAT CACATGGTCC TGCTGGANTT CGTGACCGCC 841 GCCNGGNTCA NTCTCGGCAT GGNCGANCTG TACNAGGCTA GCNAGGGAAA AATAAACTTA 901 NNTCATAGTG NNNCCTATGT TGCNCANTTT GNNNNANCCN NGGNNTNANG TTTNNTATGA 961 NNNNNNNNNA ANNNNANNTT TNNNNNNNNN AANNNNNGNN NNGNNANNNN NNNNNN // |
Primer: T7 terminator (Pr0155) Region: insert 3'(D4,EGFP 3') Sequence file: RDB13961_A6Bte.seq ![]() |
>D03144A4_A6Bt_1_T7Terminator_A04_01.ab1 1 NNNNNNNNNN TNNNNNCTTN NTNNGCNGCC GGNNCTCNGT GGTGGTGGTG GTGGTGCTCG 61 AGTGCGGCCG CAANCTTGTC GACGGAGCTC GAATTCGAGC TCGGTACCCT ATGAATCTAA 121 TACATGTAAA CCAAATTTAT TGTATAGTAA TGTCCAAAAC AAATCTAATA TTTACTTTAT 181 TATAACTCTA AAATATGAAA TAAAAAACTG ATTTTAGACT AGCTAAAATC AGTTTTTACT 241 TTAGTTTAAT TGTAAGTAAT ACTAGATCCA GGGTATAAAG TTGTTCCCCA TATTGAAACA 301 TTTATATTAT TTGTTAATGG AACATCATAT TCACTTATAA CATCTCTCCA CCATTCCCAA 361 GCAAGGCCTG TACACTCTCT TGCTTTTATT CTTATATTTC TTGCATTAGC TTCAAGAGGT 421 ATTACTGTTG AATAGTGAGC TGTTTTATCT TGATAATTTC CATCCCATGT TTTATGAGTT 481 AAAACTTCAT TTCCTTCTTT GTCATATGAA ACTTCATCCC AGGCTACTTC AAACTGTGCA 541 ACATAGGCTC CACTATGATC TAAGTTTATT TTTCCCTTGC TAGCCTTGTA CAGCTCGTCC 601 ATGCCGAGAG TGATCCCGGC GGCGGTCACG AACTCCAGCA GGACCATGTG ATCGCGCTTC 661 TCGTTGGGGT CTTTGCTCAN GGCGGANTGG GTGCTCAGGT AGTGGTTGTC GGGCAGCAGC 721 ACGGGGCCGT CGCCGATGGG GGTGTTCTGC TGGTAGTGGT CGGNGAGCTG CACGCTGCCG 781 TCCTCGATGT TGTGGCGGNT CTTGAAGTTC ACCTTGATGC CGTTCTTCTG CTTGTCNGCC 841 ATGATATANA CGTTGTGNNT GTTGTAGTTG TACTCCNGCT NNNGCCCCNN NNGNTGCCNN 901 CCNNNNNNNA GNCNATGCCC TTCAGCTCNA TGNNNNNCNN NANGGNGNCG CCNNCNAACT 961 TCNNNNNNNC NCGGGNNNNN NNNNN // |
Primer: EGFP-N_F2 (Pr1228) Region: insert mid(EGFP 3',D4 5') Sequence file: RDB13961_A6Btf.seq ![]() |
>13961_B3DpF_EGFP-N_F2_B03_02_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNC NNNNNNNNNG ANGGCAACTA CNNNACCCGN 61 NNNNAGGTGA AGTTCNAGNN NNNCACCCTG GTGAACCGCA TCGAGCTGAA GGGCATCNNN 121 TTCAAGGAGG ACGGCAACAT CCTGGGGCAC AAGCTGGAGT ACAACTACNN CAGCCACAAC 181 GTCTATATCA TGGCCGACAA GCAGAAGAAC GGCATCAAGG TGAACTTCAA GATCCGCCAC 241 AACATCGAGG ACGGCAGCGT GCAGCTCGCC GACCACTACC AGCAGAACAC CCCCATCGGC 301 GACGGCCCCG TGCTGCTGCC CGACAACCAC TACCTGAGCA CCCAGTCCGC CCTGAGCAAA 361 GACCCCAACG AGAAGCGCGA TCACATGGTC CTGCTGGAGT TCGTGACCGC CGCCGGGATC 421 ACTCTCGGCA TGGACGAGCT GTACAAGGCT AGCAAGGGAA AAATNNNNNN NGATCATAGT 481 GGAGCCTATG TTGCACAGTT TGAAGTAGCC TGGGATGAAG TTTCATATGA CAAAGAAGGA 541 AATGAAGTTT TAACTCATAA AACATGGGAT GGAAATTATC AAGATAAAAC AGCTCACTAT 601 TCAACAGTAA TACCTCTTGA AGCTAATGCA AGAAATATAA GAATAAAAGC AAGAGAGTGT 661 ACAGGCCTTG CTTGGGAATG GTGNANAGAT GTTATNNNNN AATNNNNNNT TCCATTAACN 721 AAATAATATA AATGTTTCAA TATGGGGAAC AACTTTATAC CCTGGATCTA GTATTACTTA 781 CAATTNAANC TAAAGTAAAA ACTGATTTTA GCTNNNTCTA AAATCAGTTT TTTANTTCAT 841 ATTTTANAAN NTTATAATAA AGTAAATATT AGANTTTGNT TTTGGACANN NACTATACNA 901 NTAAANTTTN GGNTTACNTG TATNANANTT CNTANGGGTN NCCNANCNNN AATTCNAGCT 961 CCNTCNNNAA GCTNGCNGGC CGNNCTCNAN CANCNNNCCN NNNNCACCNC TGANANCNGG 1021 CTGNNNNANN AANNNCNNAA ANGNANGNTG NANTTGGNNN GNNNGNCNNN CNNNNNAANC 1081 NAATNNNNNN NNNN // |
Primer: pGL3_RV4 (Pr0335) Region: lacI 3' Sequence file: RDB13961_A6Btg.seq ![]() |
>D03144A4_A6Bt_1_pGL3_RV4_F12_18.ab1 1 NNNNNNNNNN NNNNNNGNTC TCAGGGCNTC GGTCGAGNTC CCGGTGCCTA ATGAGTGAGC 61 TAACTTACAT TAATTGCGTT GCGCTCACTG CCCGCTTTCC AGTCGGGAAA CCTGTCGTGC 121 CAGCTGCATT AATGAATCGG CCAACGCGCG GGGAGAGGCG GTTTGCGTAT TGGGCGCCAG 181 GGTGGTTTTT CTTTTCACCA GTGAGACGGG CAACAGCTGA TTGCCCTTCA CCGCCTGGCC 241 CTGAGAGAGT TGCAGCAAGC GGTCCACGCT GGTTTGCCCC AGCAGGCGAA AATCCTGTTT 301 GATGGTGGTT AACGGCGGGA TATAACATGA GCTGTCTTCG GTATCGTCGT ATCCCACTAC 361 CGAGATATCC GCACCAACGC GCAGCCCGGA CTCGGTAATG GCGCGCATTG CGCCCAGCGC 421 CATCTGATCG TTGGCAACCA GCATCGCAGT GGGAACGATG CCCTCATTCA GCATTTGCAT 481 GGTTTGTTGA AAACCGGACA TGGCACTCCA GTCGCCTTCC CGTTCCGCTA TCGGCTGAAT 541 TTGATTGCGA GTGAGATATT TATGCCAGCC AGCCAGACGC AGACGCGCCG AGACAGAACT 601 TAATGGGCCC GCTAACAGCG CGATTTGCTG GTGACCCAAT GCGACCAGAT GCTCCACGCC 661 CAGTCGCGTA CCGTCTTCAT GGGAGAAAAT AATACTGTTG ATGGGTGTCT GGNCAGAGAC 721 ATCAAGAAAT AACGCCNGAA CATTAGTGCA NGCAGCTTCC ACAGCAATGG CATCCTGGTC 781 ATCCAGCGGA TAGTTAATGA NCAGCCCACT GACGCGTTGC GCGAGAAGAN TGTGCNNCGC 841 CGCTTTACAN GNTTCNACGC CGCTTCNTTC NACCATCNNN ACCACCNCGC NNNNNNCCAG 901 TTNNTCNGCG CGANANTTNA TCNNNNCGAN NNTTTNCNNN NNNNNNN // |
Please visit Sequencing and PCR primers for primer information.
Original, user report and related articles
original | Abe, M., A role for sphingomyelin-rich lipid domains in the accumulation of phosphatidylinositol-4,5-bisphosphate to the cleavage furrow during cytokinesis. Mol. Cell. Biol. 32 (8): 1396-1407 (2012). PMID 22331463. |
---|---|
original | Shimada, Y., The C-terminal domain of perfringolysin O is an essential cholesterol-binding unit targeting to cholesterol-rich microdomains. Eur. J. Biochem. 269 (24): 6195-6203 (2002). PMID 12473115. |
reference | Abe, M., Imaging cholesterol depletion at the plasma membrane by methyl-β-cyclodextrin. J. Lipid Res. 62:100077 (2021). PMID 33891936. |
protocol | Abe, M., Dynamics of sphingomyelin-and cholesterol-enriched lipid domains during cytokinesis. Methods Cell Biol. 137: 15-24 (2017). PMID 28065303. |
user_report | Lee, J.H., 25-Hydroxycholesterol suppress IFN-γ-induced inflammation in microglia by disrupting lipid raft formation and caveolin-mediated signaling endosomes. Free Radic. Biol. Med. 179: 252-265 (2022). PMID 34808332. |
2023.05.22
GNP_filter3_RDBDEP_html_230512.pl