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RIKEN DNA Bank Mouse Resource - Rab40c

Gene ID NCBI Gene 224624 |  KEGG mmu:224624
Gene Symbol Rab40c
Protein Name Rab40C, member RAS oncogene family
Synonyms RAR3
Ortholog resources KEGG ortholog (KEGG orthology K07928) in the DNA Bank
Featured content Rab Family - mouse

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14338 pEGFP-C1-Rab40 Expression vector of EGFP-tagged mouse Rab40C full-length (1-281 aa).
RDB16901 pEGFP-C1-Rab40C-G28N Expression vector of mouse Rab40C constitutive negative mutant, G28N, fused with EGFP at N-terminus.
RDB16902 pEGFP-C1-Rab40C-Q73L Expression vector of mouse Rab40C constitutive active mutant, Q73L, fused with EGFP at N-terminus.
RDB17440 pGBD-C1-Rab40C-delta Cys-G28N Expression vector of constitutive negative mutants of mouse Rab40C (G28N) for yeast two-hybrid assay.

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH081633 H4004B09 pSPORT1 BQ550575  
MCH082106 H4005E10 pSPORT1 BQ550806 BQ550805  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 224624] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -