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RIKEN DNA Bank Mouse Resource - Stx3

Gene ID NCBI Gene 20908 |  KEGG mmu:20908
Gene Symbol Stx3
Protein Name syntaxin 3
Synonyms Syn-3
Ortholog resources KEGG ortholog (KEGG orthology K08486) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB15168 pEF-FLAG-mouse syntaxin-3 Expression vector of mouse syntaxin-3 [Stx3 in NCBI].

webcatalog20210331.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH051725 H3129F05 pSPORT1 BG086709 BG073994  
MCH010078 H3025D06 pSPORT1 BG064925  
MCH015327 H3038F07 pSPORT1 BG079344 BG066078  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 20908] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2021.04.02

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_210401.pl