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RIKEN DNA Bank Mouse Resource - Calr

Gene ID NCBI Gene 12317 |  KEGG mmu:12317
Gene Symbol Calr
Protein Name calreticulin
Synonyms CRT|Calregulin
Featured content Lectin - mouse
Ortholog resource in our bank


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB17363 pMRX-bsr-ss-EGFP Retroviral expression vector of secretory form of EGFP.
RDB17364 pMRX-bsr-ss-EGFP-FM4 Retroviral expression vector of secretory form of EGFP fused with a conditional aggregation domain.
RDB17365 pMRX-bsr-ss-EGFP-FM4-TMD Retroviral expression vector enabling a synchronized trafficking assay.
RDB19002 pMRX-bsr-ss-sfGFP Retroviral expression vector of a model soluble secretory rotien that consists of a signal sequence (ss) and superfolder GFP.
RDB19428 ER-scFv-A36-expressing vector Expression vector of secreted ER-targeted mouse scFv-A36 that binds to C2A domain of SytI/II with T7- and 6xHis-tags.

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH008555 H3021G11 pSPORT1 BG077856 BG064608  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 12317] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -