RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - RPS27A

Gene ID	NCBI Gene 6233 \| KEGG hsa:6233
Gene Symbol	RPS27A
Protein Name	ribosomal protein S27a
Synonyms	CEP80\|HEL112\|S27A\|UBA80\|UBC\|UBCEP1\|UBCEP80\|eS31
Featured content	SARS-CoV-2 relevant human genes
Featured content	Mitophagy - human

Link

Ortholog resource in our bank

RPS27A

External database

human RPS27A

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB15747	mCherry-Ubiquitin	Expression vector of human ubiquitin.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGY067418	IRAK168J02	pBluescriptR	BC066293	NM_002954	Full
HGX046137	IRAK115F17	pCMV-SPORT6	BC053371	NM_002954	Full/var
HGY081899	IRAL004M11	pOTB7	BC001392	NM_002954	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE013212	W01A033A12	pENTR-TOPO	IRAL004M11	BC001392	NM_002954.6	full

♦ W series clone contains a stop codon.

GNP_entry_W01A_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR042002	ARe05A02	pKA1U5	NM_002954.4
HKR042002	TCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR042409	ARe06A09	pKA1U5	NM_002954.4
HKR042409	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR043211	ARe08A11	pKA1U5	NM_002954.4
HKR043211	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR045260	ARe13C12	pKA1U5	NM_002954.4
HKR045260	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR046054	ARe15C06	pKA1U5	NM_002954.4
HKR046054	TGGCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAA
HKR048955	ARe22G11	pKA1U5	NM_002954.4
HKR048955	GCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR049303	ARe23E07	pKA1U5	NM_002954.4
HKR049303	GGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGT
HKR052405	ARe31A05	pKA1U5	NM_002954.4
HKR052405	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR053628	ARe34B04	pKA1U5	NM_002954.4
HKR053628	GGTGGGCCTGCGCGGCGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAA
HKR054052	ARe35C04	pKA1U5	NM_002954.4
HKR054052	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCNACCAAAATGCAGATTTTCGTGAA
HKR057769	ARe44H01	pKA1U5	NM_002954.4
HKR057769	GGTTCTTCCTTTTCGATCCGCCATCTGCGGTGCCNTTTNCCACCAAAATGCAGATTTTCG
HKR058883	ARe47D11	pKA1U5	NM_002954.4
HKR058883	GATCTGCGGTGGGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCT
HKR060579	ARe51H11	pKA1U5	NM_002954.4
HKR060579	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR061234	ARe53B10	pKA1U5	NM_002954.4
HKR061234	GGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACCCTTACG
HKR068812	ARe72A12	pKA1U5	NM_002954.4
HKR068812	GGGTGGGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTG
HKR070531	ARe76F11	pKA1U5	NM_002954.4
HKR070531	GCTTCCTTTTCGATCCGCCATCTGCGGTGGANCCGNCACCAAAATGCAGATTTTCGTGAA
HKR082035	ARf05B11	pKA1U5	NM_002954.4
HKR082035	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR164403	ARi11A03	pGCAP10	NM_002954.4
HKR164403	TGCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGA
HKR176176	ARi40H08	pGCAP10	NM_002954.4
HKR176176	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR177351	ARi43G07	pGCAP10	NM_002954.4
HKR177351	TTTTTTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR177755	ARi44G11	pGCAP10	NM_002954.4
HKR177755	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR182554	ARi56G10	pGCAP10	NM_002954.4
HKR182554	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR187699	ARi69E03	pGCAP10	NM_002954.4
HKR187699	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR203387	ARiS008H19	pGCAP10	NM_002954.4
HKR203387	GGGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTGATCC
HKR205384	ARiS013H16	pGCAP10	NM_002954.4
HKR205384	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR205454	ARiS013K14	pGCAP10	NM_002954.4
HKR205454	CGGCCGGCCGATATCGTGTGGTACCGCGGCCGCGGATCTCCCTTTAGTGAGGGTTAATTG
HKR218349	ARiS045O13	pGCAP10	NM_002954.4
HKR218349	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR222025	ARiS055B01	pGCAP10	NM_002954.4
HKR222025	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR234205	ARiS085I13	pGCAP10	NM_002954.4
HKR234205	GCTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR260245	ARiS150K05	pGCAP10	NM_002954.4
HKR260245	GCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR264702	ARiS161M14	pGCAP10	NM_002954.4
HKR264702	GCTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR264731	ARiS161N19	pGCAP10	NM_002954.4
HKR264731	GAGGCNCTNCCGGGCCGGCGCTGGGGNNNGAANGANGANAAGGANAAGCGNCGCCTCGAC
HKR276601	ARiS191I09	pGCAP10	NM_002954.4
HKR276601	GGTGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTGATC
HKR320902	RBb02E06	pKA1U5	NM_002954.4
HKR320902	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR322873	RBb07D01	pKA1U5	NM_002954.4
HKR322873	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCNAAATGCAGATTTTCGTGAAAACC
HKR322930	RBb07F10	pKA1U5	NM_002954.4
HKR322930	TGCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGA
HKR323674	RBb09D02	pKA1U5	NM_002954.4
HKR323674	GCTTTTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR335723	RBb39F03	pGCAP1	NM_002954.4
HKR335723	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR344483	RBb61D11	pGCAP1	NM_002954.4
HKR344483	CGGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCG
HKR344947	RBb62G03	pGCAP1	NM_002954.4
HKR344947
HKR346905	RBb67E09	pGCAP1	NM_002954.4
HKR346905	TCTTTTTTTTTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTC
HKR347729	RBb69F09	pGCAP1	NM_002954.4
HKR347729	GGCCATCTGCGGTGGGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCT
HKR360453	RBd01C05	pGCAP10	NM_002954.4
HKR360453	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR361674	RBd04D02	pGCAP10	NM_002954.4
HKR361674	GCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR362572	RBd06H04	pGCAP10	NM_002954.4
HKR362572	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR363609	RBd09A09	pGCAP10	NM_002954.4
HKR363609	CCTGCGCGGCGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCA
HKR365280	RBd13D08	pGCAP10	NM_002954.4
HKR365280	TGCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR365371	RBd13H03	pGCAP10	NM_002954.4
HKR365371	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR366922	RBd17F02	pGCAP10	NM_002954.4
HKR366922	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR368433	RBd21B09	pGCAP10	NM_002954.4
HKR368433	TAAAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTTGGGGTTTG
HKR368434	RBd21B10	pGCAP10	NM_002954.4
HKR368434	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR368578	RBd21H10	pGCAP10	NM_002954.4
HKR368578	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR369231	RBd23B07	pGCAP10	NM_002954.4
HKR369231	GCTTCCTTTTCGATCCACCATCTGCGGGGGAACCGCCATCTCGGGCTCNATTTTCNTGAA
HKR369234	RBd23B10	pGCAP10	NM_002954.4
HKR369234	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR369780	RBd24H12	pGCAP10	NM_002954.4
HKR369780	GGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTGATCCCTG
HKR370553	RBd26G09	pGCAP10	NM_002954.4
HKR370553	GGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGT
HKR371253	RBd28C05	pGCAP10	NM_002954.4
HKR371253	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR371371	RBd28H03	pGCAP10	NM_002954.4
HKR371371	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR372572	RBd31H04	pGCAP10	NM_002954.4
HKR372572	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR382975	RBd57H07	pGCAP10	NM_002954.4
HKR382975	GGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTNCNNNNNNNNNCCCTGACCT
HKR384410	RBd61A10	pGCAP10	NM_002954.4
HKR384410	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR393697	RBd84E01	pGCAP10	NM_002954.4
HKR393697	GCTTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAA
HKR398055	RBd95C07	pGCAP10	NM_002954.4
HKR398055	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR402885	RBdS007D13	pGCAP10	NM_002954.4
HKR402885	GCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR405693	RBdS014D21	pGCAP10	NM_002954.4
HKR405693	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR405940	RBdS014O04	pGCAP10	NM_002954.4
HKR405940	GGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTGATCCCTG
HKR406102	RBdS015E06	pGCAP10	NM_002954.4
HKR406102	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR406374	RBdS015P14	pGCAP10	NM_002954.4
HKR406374	GCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR416321	RBdS040N09	pGCAP10	NM_002954.4
HKR416321	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR428141	RBdS070F21	pGCAP10	NM_002954.4
HKR428141	GGTTCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGT
HKR430342	RBdS075O06	pGCAP10	NM_002954.4
HKR430342	GCTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAA
HKR441606	RBdS104A06	pGCAP10	NM_002954.4
HKR441606	GCTTTCCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGA
HKR444094	RBdS110D22	pGCAP10	NM_002954.4
HKR444094	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR461840	RBdS154J24	pGCAP10	NM_002954.4
HKR461840	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR462706	RBdS156M18	pGCAP10	NM_002954.4
HKR462706	GCTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACC
HKR470843	RBdS177B19	pGCAP10	NM_002954.4
HKR470843	TTTTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAAC
HKR470994	RBdS177I02	pGCAP10	NM_002954.4
HKR470994	GGTGTCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTTGTGATCCC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2024May11.csv
NRCDhumcloneList_RB_2024May11.csv

2024.10.03

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl