Resource data sheet
Prev.
Please review the QC test results indicated by check icon below as well as clone information before placing your order.

GEPRA-AA

Genetically encoded indicator for RA, GEPRA. Low-affinity verson of the GEPRA-B.

Catalog number RDB15251
Resource name GEPRA-AA
Clone info. Genetically encoded indicator for RA, GEPRA. Low-affinity verson of the GEPRA-B, having ligand binding domain from the RAR-beta with two amino acid substitutions (R269A and S280A).
Vector backbone pCS2+ (plasmid)
Gene/insert name mouse RARbeta cDNA Aequorea victoria GFP cDNA
Depositor|Developer Miyawaki, Atsushi |
Other clones in our bank

External Database
mouse RARbeta Aequorea victoria GFP

          Reference sequence
            
           

          Distribution information

          Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
          Terms and conditions for distribution 1. The RECIPIENT should obtain written approval from the DEPOSITOR using the APPROVAL FORM prior to entering the AGREEMENT with the RIKEN BRC.
          2. A RECIPIENT who belongs to a non-profit organization may use the BIOLOGICAL RESOURCE for an academic research that is non-commercial.
          3. In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, citations of literature designated by the DEPOSITOR or an acknowledgment to the DEPOSITOR are requested.
          Shimozono S, Iimura T, Kitaguchi T, Higashijima S, Miyawaki A. (2013) Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366.
          4. The RECIPIENT agrees to provide a copy of the publication to the DEPOSITOR, oral or written, reporting use of the MATERIAL.
          5. The Recipient's Scientist agrees not to transfer the MATERIAL to any third party including any resource centers without the prior written consent of DEPOSITOR.
          Ordering Please visit Information of Request for Distribution.[link] 
          Order form 
          [Credit Card Payment]  [Bank Transfer Payment]
          Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word]
          Approval form [Word] by Dr. Atsushi Miyawaki
          Remarks
          Please obtain written approval of Dr. Atsushi Miyawaki.
          提供案内 (日本国内) [open/close]

          提供条件 1. The RECIPIENT should obtain written approval from the DEPOSITOR using the APPROVAL FORM prior to entering the AGREEMENT with the RIKEN BRC.
          2. A RECIPIENT who belongs to a non-profit organization may use the BIOLOGICAL RESOURCE for an academic research that is non-commercial.
          3. In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, citations of literature designated by the DEPOSITOR or an acknowledgment to the DEPOSITOR are requested.
          Shimozono S, Iimura T, Kitaguchi T, Higashijima S, Miyawaki A. (2013) Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366.
          4. The RECIPIENT agrees to provide a copy of the publication to the DEPOSITOR, oral or written, reporting use of the MATERIAL.
          5. The Recipient's Scientist agrees not to transfer the MATERIAL to any third party including any resource centers without the prior written consent of DEPOSITOR.
          提供依頼 手続きの詳細は、「提供申込みについて[link]」をご覧ください。
          提供依頼書 [Word]
          提供同意書 (MTA、非営利機関による非営利学術研究用)[Word]
          宮脇敦史博士による提供承諾書 [Word]
          備考 提供条件は英文のまま記載してください。
          宮脇敦史博士の書面による提供承諾が必要です。

          Catalog # Resource name Shipping form Fee (non-profit org.)
          RDB15251 GEPRA-AA DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          References and tips

          Original reference

          original Shimozono, S., Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366 (2013). PMID 23563268.

          Further references such as user reports and related articles (go to bottom)

          Featured content

          Featured content Sensor and Visualization (English text)

          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB15251_A7H9p1-2.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: pCMV-IE94_F (Pr0506)
          Region: CMV IE94 pro, SP6 pro, insert 5'
          Sequence file: RDB15251_A7H9a.seq check
          >D04498F9_1_A7H9_pCMV-IE94_F8_F05_17_ABI24.ab1
              1 AGGGGGCGGG TGGGCGGTGC CTAATGGGAG GTCTATATAA GCAATGCTCG TTTAGGGAAC
             61 CGCCATTCTG CCTGGGGACG TCGGAGCAAG CTTGATTTAG GTGACACTAT AGAATACAAG
            121 CTACTTGTTC TTTTTGCAGG ATCCCATGGT GAGCAAGGGC GAGGAGCTGT TCACCGGGGT
            181 GGTGCCCATC CTGGTCGAGC TGCAGGGCGA CGTAAACGGC CACAAGTTCA GCGTGTCCGG
            241 CGAGGGCGAG GGCGATGCCA CCTACGGCAA GCTGACCCTG AAGTTCATCT GCACCACCGG
            301 CAAGCTGCCC GTGCCCTGGC CCACCCTCGT GACCACCCTG AGCTGGGGCG TGCAGTGCTT
            361 CAGCCGCTAC CCCGACCACA TGAAGCAGCA CGACTTCTTC AAGTCCGTCA TGCCCGAAGG
            421 CTACGTCCAG GAGCGCACCA TCTTCTTCAA GGACGACGGC AACTACAAGA CCCGCGCCGA
            481 GGTGAAGTTC GAGGGCGACA CCCTGGTGAA CCGCATCGAG CTGAAGGGCA TCGACTTCAA
            541 GGAGGACGGC AACATCCTGG GGCACAAGCT GGAGTACAAC TACATCAGCC ACAACGTCTA
            601 TATCACCGCC GACAAGCAGA AGAACGGCAT CAAGGCCAAC TTCAAGATCC GCCACAACAT
            661 CGTGGACGGC AGCGTGCAGC TCGCCGACCA CTACCAGCAG AACACCCCCA TCGGCGACGG
            721 CCCCGTGAAC CTGCCCGACA ACCACTACCT GAGCACCCAG TCCGCCCTGA GCAAAGACCC
            781 CAACGAGAAG CGCGATCACA TGGTCCTGCT GGAGTTCGTG ACCGCCGCCC GCATGCATGA
            841 GAGCTATGAG ATGACAGCGG AGCTAGACGA CCTCACTGAG AAAGATCCGG AAAGCCCACC
            901 AGGAAACCTT TCCCTCACTC TGCCAGCTGG GTAAATACAC CACGAATTCC AGCGCTGACC
            961 ACCGGGTCCG ATTGGACTTG GGGCCCTCTG GGGACAAATT CAGTGAGCTG GCCCACCAAG
           1021 TGCATTATTA AGATCGTGGA GTTTCGCCAA GCGTCTGCCC GGGCTTCACA GGTCTGACAT
           1081 CGCAGACCCA GAATCACCCT TGCTTCAAGG CGACCTGCCT TGGAAATATC TTTGGAATTT
          1141 CCTCTCAGGA
          //
          Primer: pAxCALNLF1 (Pr0166)
          Region: SV40 p(A), T7 pro, insert 3'
          Sequence file: RDB15251_A7H9b.seq check
          >D04498F9-1_A7H9_pAxCALNL_F1_B10_04_ABI24.ab1
              1 CCAATATATC TTAATCATGT CTGGATCTAC GTAATACGAC TCACTATAGT TCTAGAGGCT
             61 CGAGTTACTT GTACAGCTCG TTCATGCCTT CAGTGATCCC GGCGGCGGTC AGGAACTCCA
            121 GCAGGACCAT GTGATCGCGC TTCTCGTTGG GGTCTTTGAA CAGGGCGGAC TGGTAGCTCA
            181 GGTAGTGGTT GTCGGGCAGC AGCACGGGGC CGTCGCCGAT GGGGGTGTTC TGCTGGTAGT
            241 GGTCGGCGAG CTGCACGCCG CCGTCCTCGA TGTTGTGGCG GATCTTGAAG TTGGCCTTGA
            301 TGCCGTTCTT CTGCTTGTCG GCGGTGATAT AGACGTTGTG GCTGTTGTAG TTGTACTCCA
            361 GCTTGTGCCC CAGGATGTTG CCGTCCTCCT TGAAGTCGAT GCCCTTCAGC TCGATGCGGT
            421 TCACCAGGGT GTCGCCCTCG AACTTCACCT CGGCGCGGGT CTTGTAGTTG CCGTCGTCCT
            481 TGAAGAAGAT GGTGCGCTCC TGGACGTAGC CTTCGGGCAT GGCGGACTTG AAGAAGTCGT
            541 GCTGCTTCAT GTGGTCGGGG TAGCGGGCGA AGCACTGCAG GCCGTAGCCC AGGGTGGTCA
            601 CGAGGGTGGG CCAGGGCACG GGCAGCTTGC CGGTGGTGCA GAGCAGCTTC AGGGTCAGCT
            661 TGCCGTAGGT GGCATCGCCC TCGCCCTCGC CGGACACGCT GAACTTGTGG CCGTTTACGT
            721 CGCCGTCCAG CTCGACCAGG ATGGGCACCA CCCCGGTGAA CAGCTCCTCG CCCTTGCTCA
            781 CCATGAGCTC TTCATGTCCT TCAGAATTCT CCAGCATTTC CTGAATGAGA GGTGGCATTG
            841 ATCCAGGAAT TTCCATTTTC AAGGTAATTA CACGTTCGGC ACCTTTCGCG CTGATGCTGC
            901 GGAGATCTGT GATTTTCATT TAGATCTTTG GAAACATGTG AGGCTTGCTG GGTCGTCGTT
            961 TTCTAATGTA ATCTTTAGTG CTTCAGCAGT GATTCTTGAA GCTTGTCTAC TTTGTGGTCT
           1021 CAGTCTTGCC GGTCTCCACA GATAAACAGA TGCACTTGGA CAGGCTGTTC TTGGTTCATC
          1081 ATCGAACCAG ACTGCTGCAA AGGTGACACT CGA
          //
          Primer: RARbeta_LBD (Pr0507)
          Region: insert mid
          Sequence file: RDB15251_A7H9c.seq check
          >D04498F9_1_A7H9_RARbeta_LBD_G05_20_ABI24.ab1
              1 CGGTAGGGAG AGGGTGGCAT TGATCCAGGA ATTTCCATTT TCAAGGTAAT TACACGTTCG
             61 GCACCTTTCG CGCTGATGCT GCGGAGATCT GTGATTTTCA TTAAGATCTT TGGAAACATG
            121 TGAGGCTTGC TGGGTCGTCG TTTTCTAATG TAAATCTTTA GTGCTTCCAG CAGTGGTTCT
            181 TGGAGCTTGT CTACTTTTGT TGGTTCCTCA AGGTCCTGGC GGTCTCCACA GATTAAACAG
            241 ATGGCACTGA GAAGGCCTGT TTCTGTGTCA TCCATTTCCA AAGGCAGGAG CTGGTTGGCA
            301 AAGGTGAACA CAAGGTCAGT CAGAGGACCG AAGCCAGCAT TGTGCATCTG AGTTCGATTT
            361 AGTGTAAGGC CATCAGCGAA AGTCATGGTG TCTTGCTCTG GGGTATAGGC GGTACAAATT
            421 CTGAGAATCA AGATATCCAA GCAGGCGGCT TTGAGCAGGG TGATCTGGTC TGCGATGGTC
            481 AGACCTGTGA AGCCCGGCAG ACGCTTGGCG AACTCCACGA TCTTAATAAT GCACTTGGTG
            541 GCCAGCTCAC TGAATTTGTC CCAGAGGCCC AAGTCCAATC GGACCCGGTG GTCAGCGCTG
            601 GAATTCGTGG TGTATTTACC CAGCTGGCAG AGTGAGGGAA AGGTTTCCTG GTGGGCTTTC
            661 CGGATCTTCT CAGTGAGGTC GTCTAGCTCC GCTGTCATCT CATAGCTCTC ATGCATGCGG
            721 GCGGCGGTCA CGAACTCCAG CAGGACCATG TGATCGCGCT TCTCGTTGGG GTCTTTGCTC
            781 AGGGCGGACT GGGTGCTCAG GTAGTGGTTG TCGGGCAGGT TCACGGGGCC GTCGCCGATG
            841 GGGGTGTTCT GCTGGTAGTG GTCGGCGAGC TGCACGCTGC CGTCCACGAT GTTGTGGCGG
            901 ATCTTGAAGT TGGCCTTGAT GCCGTTCTTC TGCTTGTCGG CGGTGATATA GACGTTGTGG
            961 CTGATGTAGT TGTACTCCCA GCTTGTGCCC CAGGATGTTG CCCGTCCTCC TTGAAGTCGA
           1021 TGCCCTTTCA GCTCGATGCG GTTCACAAGG TGTCGCCCTC GAACTCACTC GCGCGGGTCT
           1081 TGGTAAGTGG CCGTTCGTCT TTGGAGAGAT GTGCGCTCCT GACGTAGCCT TTCAGGACCA
          1141 TTGAAACG
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles

          original Shimozono, S., Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366 (2013). PMID 23563268.
          review Schilling, T.F., Visualizing retinoic acid morphogen gradients. Methods Cell Biol. 133: 139-163 (2016). PMID 27263412.

          2023.04.10

          GNP_filter3_RDBDEP_html_230405.pl