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RIKEN DNA Bank Mouse Resource - Xkr9

Gene ID NCBI Gene 381246 |  KEGG mmu:381246
Gene Symbol Xkr9
Protein Name X-linked Kx blood group related 9
Synonyms Gm1620|XRG9

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Ortholog resource in our bank


External dsatabase

mouse Xkr9

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB18784 pMXs-puro-mXkr9-GFP Retroviral expression vector of mouse Xkr9 tagged with GFP at C-terminus.    
RDB18776 pMXs-puro-mXkr9/2DA-FLAG Retroviral expression vector of mouse Xkr9 caspase resistant mutnat (DETDG to AETAG) tagged with FLAG at C-terminus.    
RDB18773 pMXs-puro-mXkr9-FLAG Retroviral expression vector of mouse Xkr9 tagged with FLAG at C-terminus.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab


Mouse BAC clone

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BAC clone search [map around Gene ID 381246] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2024.10.04

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl