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RIKEN DNA Bank Mouse Resource - Rab5a

Gene ID NCBI Gene 271457 |  KEGG mmu:271457
Gene Symbol Rab5a
Protein Name RAB5A, member RAS oncogene family
Synonyms 2410015H04Rik|AI663973|AU021172|nnyRab5a
Featured content Endocytosis (mouse)
Featured content Rab Family - mouse
Featured content Amyotrophic lateral sclerosis (ALS) - mouse
Ortholog resource in our bank

  Rab5a

External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14677 pEF-BOS FLAG-mouse Rab5A Expression vector of mouse Rab5A.
RDB15726 pEGFP-C1-mouse Rab5A-Q79L Expression vector of mouse Rab5A constitutive active mutant EGFP-tag.
RDB15727 pSilencer-neo-Rab5A Expression vector of shRNA against mouse Rab5A.
RDB15728 pSilencer-neo-Rab5B/C Expression vector of shRNA against mouse Rab5B/C.
RDB16831 pGEX-4T-3-Rab5A Expression vector of mouse Rab5A tagged with GST at N-terminus, tac promoter.
RDB16874 pEGFP-C1-Rab5A-S34N Expression vector of mouse Rab5A constitutive negative mutant, S34N, fused with EGFP at N-terminus.
RDB17222 pMRX-puro-EGFP-Rab5A Retroviral expression vector of mouse Rab5A, fused with EGFP.
RDB17246 pEGFP-C1-Rab5A Expression vector of mouse Rab5A fused with EGFP.
RDB17359 pMRX-bsr-Myc-Rab5A Retroviral expression vector of mouse Rab5A.
RDB17393 pGBD-C1-Rab5A-delta Cys-S34N Expression vector of constitutive negative mutants of mouse Rab5A (S34N) for yeast two-hybrid assay.
RDB18822 pGBD-C1-Rab5A-deltaCys-Q79L Expression vector of mouse Rab5A constitutive active mutant (Q79L) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB18823 pGBD-C1-Rab5A-deltaCys-N133I Expression vector of mouse Rab5A constitutive negative mutant (N133I) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB19417 pFX-EGFP-Rab5 Expression vector of EGFP with early endosome-targeting sequence (mouse RAB5A) in mammalian cells.
RDB19430 pMRX-bsr-Flag-AID-Rab5A Retroviral expression vector of mouse Rab 5A tagged with FLAG-auxin-inducible degron (AID).

webcatalog20220516.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH032480 H3081D08 pSPORT1 BG082847 BG069907  
MCH044503 H3111E07 pSPORT1 CK334807  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2022Dec01.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 271457] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.04.06

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl