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RIKEN DNA Bank Mouse Resource - Ankrd27

Gene ID NCBI Gene 245886 |  KEGG mmu:245886
Gene Symbol Ankrd27
Protein Name ankyrin repeat domain 27 (VPS9 domain)
Synonyms AA408090|BC016493|D330003H11Rik|Varp
Ortholog resource in our bank


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14333 pEF-FLAG-Varp Expression vector of FLAG-tagged mouse VPS9-ankyrin-repeat protein (Varp) full-length (1-1048 aa)
RDB14334 pEF-T7-Varp Expression vector of mouse VPS9-ankyrin-repeat protein (Varp) full-length (1-1048 aa).
RDB17371 pEF-T7-GST-RBD32/38 Expression vector of ANKR1domain of mouse Ankrd27.

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH006435 H3016B11 pSPORT1 BG077502 BG064159  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 245886] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -