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RIKEN DNA Bank Mouse Resource - Malt1

Gene ID NCBI Gene 240354 |  KEGG mmu:240354
Gene Symbol Malt1
Protein Name MALT1 paracaspase
Synonyms A630046N12|D430033E09Rik|Pcasp1
Featured content NF-kappa B signaling pathway (mouse)
Featured content T cell receptor signaling pathway (mouse)
Featured content B cell receptor signaling pathway (mouse)
Ortholog resource in our bank

  Malt1


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH003722 H3009F02 pSPORT1 BG076994 BG063629  
MCH020151 H3050G07 pSPORT1 BG080189 BG067116  
MCH085771 H4014H03 pSPORT1 BQ552302  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 240354] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2023.09.24

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl