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RIKEN DNA Bank Mouse Resource - Nr1d1

Gene ID NCBI Gene 217166 |  KEGG mmu:217166
Gene Symbol Nr1d1
Protein Name nuclear receptor subfamily 1, group D, member 1
Synonyms A530070C09Rik
Featured content Circadian clock (mouse)

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Ortholog resource in our bank

  Nr1d1

External dsatabase

mouse Nr1d1

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB14183 pcDNA3-mREV-erb alpha Expression vector of mouse REV-erb alpha.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 217166] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.10.01

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl