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RIKEN DNA Bank Mouse Resource - Hps4

Gene ID NCBI Gene 192232 |  KEGG mmu:192232
Gene Symbol Hps4
Protein Name HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
Synonyms 2010205O06Rik|BLOC-3|C130020P05Rik|le|mKIAA1667
Ortholog resource in our bank

  Hps4


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB17366 pEF-T7-HPS4 Expression vector of mouse HPS4.
RDB17367 pEF-T7-HPS4(S541A/N543A) Expression vector of mouse HPS4, Rab9-binding-deficient mutant (S541A/N543A).
RDB17368 pEF-T7-HPS4(G55W/G59M) Expression vector of mouse HPS4, Rab32/38-GEF-activity-deficient mutant (G55W/G59M).

webcatalog20220516.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH038574 H3096H06 pSPORT1 BG084145 BG071275  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 192232] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2023.08.17

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl