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RIKEN DNA Bank Mouse Resource - Havcr1

Gene ID NCBI Gene 171283 |  KEGG mmu:171283
Gene Symbol Havcr1
Protein Name hepatitis A virus cellular receptor 1
Synonyms AI503787|KIM-1|TIM-1|Tim1|Timd1
Ortholog resource in our bank

  Havcr1


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB18978 pMXs-puro-Tim1 Retroviral expression vector of mouse Havcr1 (Tim1).
RDB18982 pMXs-puro-Tim1-EGFP Retroviral expression vector of mouse Havcr1 (Tim1) tagged with EGFP at C-terminus.
RDB18986 pEF-Tim1-Fc Mammalian expression vector of the extracellular region of mouse Havcr1 (Tim1) (aa 1-199).

webcatalog20220516.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH040478 H3101D06 pSPORT1 BG084479 BG071634  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2022Apr03.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 171283] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2022.07.13

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl