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RIKEN DNA Bank Mouse Resource - Tirap

Gene ID NCBI Gene 117149 |  KEGG mmu:117149
Gene Symbol Tirap
Protein Name toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
Synonyms AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt
Ortholog resources KEGG ortholog (KEGG orthology K05403) in the DNA Bank
Featured content NF-kappa B signaling pathway (mouse)
Featured content Toll-like receptor signaling pathway - mouse

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH002831 H3007B07 pSPORT1 CK334147 BG063428  
MCH001380 H3003H12 pSPORT1 BG076639 BG063175  
MCH035325 H3088F05 pSPORT1 BG083551 BG070556  
MCH012081 H3030D09 pSPORT1 BG078662 BG065379  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 117149] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -