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RIKEN DNA Bank Mouse Resource - Csnk1a1

Gene ID NCBI Gene 93687 |  KEGG mmu:93687
Gene Symbol Csnk1a1
Protein Name casein kinase 1, alpha 1
Synonyms 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a
Ortholog resources KEGG ortholog (KEGG orthology K08957) in the DNA Bank
Featured content Hedgehog signaling (mouse)
Featured content Wnt signaling pathway (mouse)
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH034025 H3085B01 pSPORT1 BG083155 BG070230  
MCH044036 H3110B12 pSPORT1 BG085236 BG072410  
MCH033284 H3083D12 pSPORT1 BG083010 BG069996  
MCH110449 H4076C01 pSPORT1 BQ562478 BQ562477  
MCH052056 H3130C08 pSPORT1 CK334991  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 93687] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl