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RIKEN DNA Bank Mouse Resource - Ern1

Gene ID NCBI Gene 78943 |  KEGG mmu:78943
Gene Symbol Ern1
Protein Name endoplasmic reticulum (ER) to nucleus signalling 1
Synonyms 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p
Ortholog resources KEGG ortholog (KEGG orthology K08852) in the DNA Bank
Featured content Apoptosis - mouse
Featured content Alzheimer disease - mouse
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NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH021284 H3053D12 pSPORT1 BG080422 BG067353  
MCH057636 H3144B12 pSPORT1 BG087641 BG075179  
MCH020480 H3051D08 pSPORT1 BG080244 BG067173  
MCH035777 H3089H09 pSPORT1 BG083506 BG070677  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 78943] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2019.05.17

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_190501.pl