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RIKEN DNA Bank Mouse Resource - Rab11fip2

Gene ID NCBI Gene 74998 |  KEGG mmu:74998
Gene Symbol Rab11fip2
Protein Name RAB11 family interacting protein 2 (class I)
Synonyms 4930470G04Rik|A830046J09Rik|Nrip11
Featured content Endocytosis (mouse)

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Ortholog resource in our bank

  Rab11fip2

External dsatabase

mouse Rab11fip2

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB18798 pGAD-C1-Rab11-FIP2-C Expression vector of mouse C-terminal 124 amino acid of Rab11-FIP2 (RAB11 family interacting protein 2) for yeast two-hybrid assay.    
RDB18796 pMRX-puro-EGFP-FIP2-C Retroviral expression vector of mouse C-terminal domain of RAB11 family interacting protein 2 (Rab11-FIP2) tagged with EGFP.    
RDB18793 pMRX-puro-EGFP-FM-RBD11-mut Retroviral expression vector of negative control of active Rab11 trapper: FM-tagged mouse Rab11-specific binding domain (RBD 11) mutant tagged with EGFP.    
RDB18792 pMRX-puro-EGFP-FM-RBD11 Retroviral expression vector of active Rab11 trapper: FM-tagged mouse Rab11-specific binding domain (RBD 11) tagged with EGFP.    
RDB18791 pMRX-puro-EGFP-2xRBD11-mut Retroviral expression vector of negative control for visualization of active Rab11: mouse Rab11-specific binding domain (RBD11) mutant tagged with EGFP.    
RDB18790 pMRX-puro-EGFP-2xRBD11 Retroviral expression vector of negative control for visualization of active Rab11: mouse Rab11-specific binding domain (RBD11) mutant tagged with EGFP.    
RDB18789 pMRX-puro-EGFP-RBD11-mut Retroviral expression vector of negative control for visualization of active Rab11: mouse Rab11-specific binding domain (RBD11) mutant tagged with EGFP.    
RDB18788 pMRX-puro-EGFP-RBD11 Retroviral expression vector for visualization of active Rab11: mouse Rab11-specific binding domain (RBD11) tagged with EGFP.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH062107 H3155E11 pSPORT1 BG088624 BG076094  
MCH018930 H3047F10 pSPORT1 BG079917 BG066850  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 74998] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.12.10

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl