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RIKEN DNA Bank Mouse Resource - Als2

Gene ID NCBI Gene 74018 |  KEGG mmu:74018
Gene Symbol Als2
Protein Name alsin Rho guanine nucleotide exchange factor
Synonyms 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563
Featured content Amyotrophic lateral sclerosis (ALS) - mouse

Link

Ortholog resource in our bank

  Als2


External dsatabase

mouse Als2

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB17220 pEF-T7-mALS2-D1593A Expression vector of mouse ALS2, a GEF-activity-deficient mutant, D1593A, tagged with T7-tag.    
RDB17219 pEF-T7-mALS2 Expression vector of mouse ALS2, tagged with T7-tag.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH062458 H3156C10 pSPORT1 BG088685 BG076158  
MCH086932 H4017F12 pSPORT1 BQ552718 BQ552717  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 74018] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


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2024.09.25

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl