RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Wdfy3

Gene ID	NCBI Gene 72145 \| KEGG mmu:72145
Gene Symbol	Wdfy3
Protein Name	WD repeat and FYVE domain containing 3
Synonyms	2610509D04Rik\|ALFY\|B930017C24\|BWF1\|Bchs\|D5Ertd66e\|Ggtb3\|ZFYVE25\|mKIAA0993

Ortholog resource in our bank

Wdfy3

External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number	Name of Resource	Description
RDB01800	galactosyltransferase	Mouse testis beta 1,4-galactosyltransferase cDNA

webcatalog20220516.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH015205	H3038A05	pSPORT1	BG079286	BG066020
MCH105652	H4064C04	pSPORT1	BQ560426	BQ560425
MCH006454	H3016C06	pSPORT1	BG077509	BG064166
MCH015675	H3039D03	pSPORT1	BG079402	BG066137
MCH047779	H3119H11	pSPORT1	BG085943	BG073204

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 72145] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.08.17

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl