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RIKEN DNA Bank Mouse Resource - Nanog

Gene ID NCBI Gene 71950 |  KEGG mmu:71950
Gene Symbol Nanog
Protein Name Nanog homeobox
Synonyms 2410002E02Rik|ENK|ecat4
Ortholog resources KEGG ortholog (KEGG orthology K10164) in the DNA Bank
Featured content Signaling pathways regulating pluripotency of stem cells (mouse)
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB12116 pNanog-luc Oct-Sox enhancer carrying reporter derived from Nanog promoter.
RDB13377 pRZ-mNanog-YNL Lentiviral reporter plasmid of mouse Nanog by the Yellow Nano-lantern.

RDB_org_190226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH020007 H3050A07 pSPORT1 BG080126 BG067052  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 71950] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2019.05.21

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_190501.pl