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RIKEN DNA Bank Mouse Resource - Optn

Gene ID NCBI Gene 71648 |  KEGG mmu:71648
Gene Symbol Optn
Protein Name optineurin
Synonyms 4930441O07Rik|FIP2|HYPL|NRP
Ortholog resources KEGG ortholog (KEGG orthology K19946) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB16718 pEF6-Myc-mouse Optineurin Expression vector of mouse Optineurin (OPTN), wild type, tagged with Myc.
RDB16719 pEF6-Myc-mouse Optineurin(E50K) Expression vector of mouse Optineurin (OPTN), E50K mutant, tagged with Myc.
RDB16720 pEF6-Myc-mouse Optineurin(D474N) Expression vector of mouse Optineurin (OPTN), D474N mutant, tagged with Myc.
RDB16721 pEF6-Myc-mouse Optineurin(H486R) Expression vector of mouse Optineurin (OPTN), H486R mutant, tagged with Myc.

webcatalog20210331.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH087772 H4019H04 pSPORT1 BQ553074 BQ553073  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 71648] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2021.04.02

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_210401.pl