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RIKEN DNA Bank Mouse Resource - Nipbl

Gene ID NCBI Gene 71175 |  KEGG mmu:71175
Gene Symbol Nipbl
Protein Name NIPBL cohesin loading factor
Synonyms Idn3
Ortholog resources KEGG ortholog (KEGG orthology K06672) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH037205 H3093A05 pSPORT1 BG083862 BG070859  
MCH052073 H3130D01 pSPORT1 BG086770 BG074057  
MCH081731 H4004F11 pSPORT1 BQ550659 BQ550658  
MCH100921 H4052F01 pSPORT1 BQ558505 BQ558504  
MCH056550 H3141G06 pSPORT1 BG087681 BG074983  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 71175] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl