RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Rab43

Gene ID	NCBI Gene 69834 \| KEGG mmu:69834
Gene Symbol	Rab43
Protein Name	RAB43, member RAS oncogene family
Synonyms	1810048P08Rik\|2500004H21Rik
Featured content	Rab Family - mouse

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Ortholog resource in our bank

Rab43

External dsatabase

mouse Rab43

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB18919	pGBD-C1-Rab41-deltaCys-N129I	Expression vector of mouse Rab41 constitutive negative mutant (N129I) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB18918	pGBD-C1-Rab41-deltaCys-Q75L	Expression vector of mouse Rab41 constitutive active mutant (Q75L) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB17441	pGBD-C1-Rab41-delta Cys-T30N	Expression vector of constitutive negative mutants of mouse Rab41 (T30N) for yeast two-hybrid assay.
RDB16863	pGEX-4T-3-Rab41	Expression vector of mouse Rab41 tagged with GST at N-terminus, tac promoter.
RDB15978	pEGFP-C1-Rab41-Q75L	Expression vector of mouse Rab41 constitutive active mutant, Q75L.
RDB15977	pEGFP-C1-Rab41-T30N	Expression vector of mouse Rab41 constitutive negative mutant, T30N.
RDB15976	pEGFP-C1-Rab41	Expression vector of mouse Rab41.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH101258	H4053C10	pSPORT1	BQ558616
MCH110529	H4076F09	pSPORT1		BQ562559

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 69834] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.09.29

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl