RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Rab13

Gene ID	NCBI Gene 68328 \| KEGG mmu:68328
Gene Symbol	Rab13
Protein Name	RAB13, member RAS oncogene family
Synonyms	0610007N03Rik\|B230212B15Rik
Featured content	Rab Family - mouse

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Ortholog resource in our bank

Rab13

External dsatabase

mouse Rab13

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB18855	pGBD-C1-Rab13-deltaCys-N121I	Expression vector of mouse Rab13 constitutive negative mutant (N121I) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB18854	pGBD-C1-Rab13-deltaCys-Q67L	Expression vector of mouse Rab13 constitutive active mutant (Q67L) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.
RDB17409	pGBD-C1-Rab13-delta Cys-T22N	Expression vector of constitutive negative mutants of mouse Rab13 (T22N) for yeast two-hybrid assay.
RDB17260	pEGFP-C1-Rab13	Expression vector of mouse Rab13 fused with EGFP.
RDB17224	pMRX-puro-EGFP-Rab13	Retroviral expression vector of mouse Rab13, fused with EGFP.
RDB16838	pGEX-4T-3-Rab13	Expression vector of mouse Rab13 tagged with GST at N-terminus, tac promoter.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH006105	H3015E09	pSPORT1	BG077453	BG064106

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 68328] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.10.04

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl