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RIKEN DNA Bank Mouse Resource - Chd8

Gene ID NCBI Gene 67772 |  KEGG mmu:67772
Gene Symbol Chd8
Protein Name chromodomain helicase DNA binding protein 8
Synonyms 5830451P18Rik|AU015341|Chd-8|Duplin|HELSNF1|mKIAA1564
Ortholog resources KEGG ortholog (KEGG orthology K04494) in the DNA Bank
Featured content Wnt signaling pathway (mouse)

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH026850 H3067C02 pSPORT1 BG081622 BG068593  
MCH048457 H3121C09 pSPORT1 BG086059 BG073323  
MCH061276 H3153D04 pSPORT1 BG088458 BG075919  
MCH086945 H4017G01 pSPORT1 BQ552719  
MCH034059 H3085C11 pSPORT1  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 67772] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -