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RIKEN DNA Bank Mouse Resource - Kcnq1ot1

Gene ID NCBI Gene 63830 |  KEGG mmu:63830
Gene Symbol Kcnq1ot1
Protein Name KCNQ1 overlapping transcript 1
Synonyms Kvlqt1-as|Lit1|Tssc8
Links

  KEGG gene

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH081356 H4003G12 pSPORT1 BQ550523 BQ550522  
MCH101282 H4053D10 pSPORT1 BQ558637 BQ558636  
MCH028033 H3070B09 pSPORT1 BG081892 BG068867  
MCH026053 H3065C05 pSPORT1 BG081445 BG068416  
MCH024409 H3061A09 pSPORT1 BG081094 BG068036  
MCH022436 H3056B12 pSPORT1 BG080742 BG067603  
MCH003610 H3009A10 pSPORT1 BG076949 BG063584  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 63830] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl