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RIKEN DNA Bank Mouse Resource - Tbk1

Gene ID NCBI Gene 56480 |  KEGG mmu:56480
Gene Symbol Tbk1
Protein Name TANK-binding kinase 1
Synonyms 1200008B05Rik
Featured content Toll-like receptor signaling pathway - mouse
Featured content Mitophagy - mouse

Link

Ortholog resource in our bank

  Tbk1

External dsatabase

mouse Tbk1

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB15224 pCA-mIKKe-Flag Expression vector of mouse I-kappaB kinase epsilon (IKK epsilon), tagged with FLAG, CAG promoter.    
RDB15223 pCA-mIKKe-HA Expression vector of mouse I-kappaB kinase epsilon (IKK epsilon), tagged with HA, CAG promoter.    
RDB15222 pCA-mIKKe-GFP Expression vector of mouse I-kappaB kinase epsilon (IKK epsilon), tagged with GFP, CAG promoter.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH033633 H3084B09 pSPORT1 BG083069 BG070144  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 56480] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.09.29

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl