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RIKEN DNA Bank Mouse Resource - Spen

Gene ID NCBI Gene 56381 |  KEGG mmu:56381
Gene Symbol Spen
Protein Name spen family transcription repressor
Synonyms Mint|mKIAA0929

Link

Ortholog resource in our bank

  Spen

External dsatabase

mouse Spen

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB13478 pEF-BOSneo-MINT RAM7-VP16-Myc Expression vector of mouse SPEN/MINT cDNA    
RDB13477 pEF-BOSneo-MINT RAM7-Myc Expression vector of mouse SPEN/MINT cDNA    
RDB13476 pEF-BOSneo-Myc-MINT deltaC Expression vector of mouse SPEN/MINT cDNA    
RDB13475 pEF-BOSneo-Myc-MINT deltaN-NLS-deltaRAM7 Expression vector of mouse SPEN/MINT cDNA    
RDB13474 pEF-BOSneo-Myc-MINT deltaN-NLS Expression vector of mouse SPEN/MINT cDNA    
RDB13473 pEF-BOSneo-Myc-MINT deltaN Expression vector of mouse SPEN/MINT cDNA    
RDB13472 pEF-BOSneo-Myc-MINT deltaRAM7-FLAG Expression vector of mouse SPEN/MINT cDNA    
RDB06777 pEF-BOSneo-Myc-MINT (1-3576)-FLAG Expression vector of mouse SPEN/MINT cDNA    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH017298 H3043E02 pSPORT1 BG079667 BG066480  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 56381] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.12.10

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl