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RIKEN DNA Bank Mouse Resource - Pdlim5

Gene ID (NCBI) 56376
Gene Symbol Pdlim5
Protein Name PDZ and LIM domain 5
Synonyms 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM
Databases KEGG link 01 |  NCBI Gene link 01


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB13418 pEF-DEST51_mm Pdlim5 Expression vector of mouse Pdlim5 in mammalian cell
RDB13419 pEF-DEST51_mm S177A Pdlim5 Expression vector of mouse Pdlim5 (S177A) in mammalian cell
RDB13420 pEF-DEST51_mm S177D Pdlim5 Expression vector of mouse Pdlim5 (S177D) in mammalian cell
RDB13421 pGEX6.1_mm Pdlim5 Bacterial expression vector of mouse Pdlim5 in E .coli
RDB13422 pGEX6.1_mm S177A Pdlim5 Bacterial expression vector of mouse Pdlim5 (S177A) in E. coli
RDB13423 pGEX6.1_mm S177D Pdlim5 Bacterial expression vector of mouse Pdlim5 (S177A) in E. coli

RDB_org_170226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH022556 H3056G12 pSPORT1 BG080635 BG067662  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 56376] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2017.08.22

Mus_musculus_gene_info140110 - RDB_mmu_GIxxxxxxxxx_html_170416.pl