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RIKEN DNA Bank Mouse Resource - Rif1

Gene ID NCBI Gene 51869 |  KEGG mmu:51869
Gene Symbol Rif1
Protein Name replication timing regulatory factor 1
Synonyms 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e
Ortholog resources KEGG ortholog (KEGG orthology K11138) in the DNA Bank
Featured content Signaling pathways regulating pluripotency of stem cells (mouse)
Links

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  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH014100 H3035E04 pSPORT1 BG079075 BG065807  
MCH034176 H3085H08 pSPORT1 BG083226 BG070306  
MCH037230 H3093B06 pSPORT1 BG083874 BG070871  
MCH048551 H3121G07 pSPORT1 BG086101 BG073367  
MCH028108 H3070E12 pSPORT1 BG081930 BG068905  
MCH029308 H3073E12 pSPORT1 BG082200 BG069178  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 51869] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl