RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Ppp2r5e

Gene ID	NCBI Gene 26932 \| KEGG mmu:26932
Gene Symbol	Ppp2r5e
Protein Name	protein phosphatase 2, regulatory subunit B', epsilon
Synonyms	4633401M22Rik\|B56beta
Featured content	Sphingolipid signaling pathway (mouse)

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Ortholog resource in our bank

Ppp2r5e

External dsatabase

mouse Ppp2r5e

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB13509	pGEMHE-3mEGFP-PP2A-B56epsilon	Plasmid for in vitro transcription of mouse PP2A B56 isoform epsilon in mouse oocyte.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH039326	H3098F06	pSPORT1	BG084281	BG071412
MCH084106	H4010E10	pSPORT1	BQ551636	BQ551635
MCH014058	H3035C10	pSPORT1	BG079058	BG065790

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 26932] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

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Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl