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RIKEN DNA Bank Mouse Resource - Exo1

Gene ID (NCBI) 26909
Gene Symbol Exo1
Protein Name exonuclease 1
Synonyms 5730442G03Rik|Msa
Databases KEGG link 01 |  NCBI Gene link 01


NIA/NIH Mouse cDNA Clone link 01

Catalog number Clone name Vector Sequence
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH020474 H3051D02 pSPORT1 BG080238 BG067167
MCH026930 H3067F10 pSPORT1 BG081661 BG068634
MCH102948 H4057G04 pSPORT1 BQ559355 BQ559354

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

J:\Perl_src_\csv_set\NIAmouse22k_150728.csv


Mouse BAC clone link 01

BAC clone search [map around Gene ID 26909] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2015.11.06

J:\Perl_src_\csv_set\Mus_musculus_gene_info140110 - RDB_mmu_GIxxxxxxxxx_html_151106.pl