RIKEN DNA Bank Mouse Resource - Ezr

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
			5' terminal EST, submitted in DDBJ(1)	3' terminal EST, submitted in DDBJ(1)
MCH051748	H3129G04	pSPORT1	BG086718	BG074004
MCH026811	H3067A11	pSPORT1	BG081607	BG068578
MCH062554	H3156G10	pSPORT1	BG088727	BG076201
MCH005723	H3014F03	pSPORT1	CK334301
MCH100507	H4051E11	pSPORT1	BQ558333

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

Mouse BAC clone

Clone request [in Japanese] [in English]

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.09.23