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RIKEN DNA Bank Mouse Resource - Tcea1

Gene ID NCBI Gene 21399 |  KEGG mmu:21399
Gene Symbol Tcea1
Protein Name transcription elongation factor A (SII) 1
Synonyms S-II
Ortholog resources KEGG ortholog (KEGG orthology K03145) in the DNA Bank
Links

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  KEGG Ortholog

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH012124 H3030F04 pSPORT1 BG078677 BG065395  
MCH030178 H3075H10 pSPORT1 BG082414 BG069474  
MCH055722 H3139F02 pSPORT1 BG087433 BG074810  
MCH026052 H3065C04 pSPORT1 BG081444 BG068415  
MCH090406 H4026A06 pSPORT1 BQ554087 BQ554086  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 21399] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl