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RIKEN DNA Bank Mouse Resource - Suv39h1

Gene ID NCBI Gene 20937 |  KEGG mmu:20937
Gene Symbol Suv39h1
Protein Name suppressor of variegation 3-9 1
Synonyms AI852103|AL022883|DXHXS7466e|H3-K9-HMTase 1|KMT1A|mIS6
Ortholog resource in our bank

  Suv39h1


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB15880 pGEX6P-3-SUV39H1(39-105) Expression vector of mouse SUV39H1, chromodomain (residues 39-105).
RDB15881 pGEX6P-3-SUV39H1(39-105)-4A Expression vector of mouse SUV39H1, chromodomain (residues 39-105), nucleic acid-binding defective mutant (R84A, K87A, K91A, R95A).
RDB15882 pGEX6P-3-SUV39H1(39-105)-Y67A Expression vector of mouse SUV39H1, chromodomain (residues 39-105), methylated H3K9 binding mutant (Y67A).
RDB15883 pMCs-FLAG-Suv39h1-IRES-GFP Retroviral expression vector of mouse SUV39H1, wild type.
RDB15884 pMCs-FLAG-Suv39h1-4A-IRES-GFP Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R84A, K87A, K91A, R95A).
RDB15885 pMCs-FLAG-Suv39h1-Y67A-IRES-GFP Retroviral expression vector of mouse SUV39H1, methylated H3K9 binding mutant (Y67A).
RDB15886 pMCs-FLAG-Suv39h1-Y67A-4A-IRES-GFP Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant and methylated H3K9 binding mutant (R84A, K87A, K91A, R95A and Y67A).
RDB15887 pMCs-FLAG-Suv39h1-deltaN-IRES-GFP Retroviral expression vector of mouse SUV39H1, N-terminal truncated mutant (delta 1-41).
RDB15888 pMCs-FLAG-Suv39h1-R24,K27A-IRES-GFP Retroviral expression vector of mouse SUV39H1, N-terminal mutant (R24A, K27A).
RDB15889 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1 Expression vector of mouse SUV39H1, wild type.
RDB15890 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-H324L Expression vector of mouse SUV39H1, SET domain mutant (H324L).
RDB15891 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-4A Expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R84A, K87A, K91A, R95A).
RDB15892 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-Y67A Expression vector of mouse SUV39H1, methylated H3K9 binding mutant (Y67A).
RDB15893 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-Y67A-4A Expression vector of mouse SUV39H1, nucleic acid-binding defective mutant and methylated H3K9 binding mutant (R84A, K87A, K91A, R95A and Y67A).
RDB15894 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-mut1 Expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R84A, K87A).
RDB15895 pCAG-FLAG-IRESpuro (NRI)-mmSuv39H1-mut3 Expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R99A, R100A).
RDB15896 pMCs-GFP-Suv39h1 Retroviral expression vector of mouse SUV39H1, wild type.
RDB15897 pMCs-GFP-Suv39h1-4A Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R84A, K87A, K91A, R95A).
RDB15898 pMCs-GFP-Suv39h1-Y67A Retroviral expression vector of mouse SUV39H1, methylated H3K9 binding mutant (Y67A).
RDB15899 pMCs-GFP-Suv39h1-Y67A-4A Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant and methylated H3K9 binding mutant (R84A, K87A, K91A, R95A and Y67A).
RDB15900 pMCs-GFP-Suv39h1-mut1 Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R84A, K87A).
RDB15901 pMCs-GFP-Suv39h1-mut3 Retroviral expression vector of mouse SUV39H1, nucleic acid-binding defective mutant (R99A, R100A).

webcatalog20220516.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH056548 H3141G04 pSPORT1 BG087679 BG074981  
MCH042170 H3105H02 pSPORT1 BG084777 BG072025  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2022Dec01.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 20937] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2023.04.06

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl