RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Stat3

Gene ID	NCBI Gene 20848 \| KEGG mmu:20848
Gene Symbol	Stat3
Protein Name	signal transducer and activator of transcription 3
Synonyms	1110034C02Rik\|Aprf
Featured content	Signaling pathways regulating pluripotency of stem cells (mouse)
Featured content	Jak-STAT signaling pathway (mouse)
Featured content	HIF-1 signaling pathway - mouse

Link

Ortholog resource in our bank

Stat3

External dsatabase

mouse Stat3

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB02954	mouse STAT3	Plasmid clone of mouse Stat3 cDNA, PCR fragment
RDB02354	pEF-Flag-mSTATY705F	Expression vector of mouse STAT3 dominant negative mutant.
RDB02353	pEF-Flag-mSTAT3 (wild)	Expression vector of mouse STAT3

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH063348	H3158G04	pSPORT1	BG088879	BG076355
MCH040030	H3100B06	pSPORT1	BG084377	BG071535
MCH030860	H3077C12	pSPORT1	BG082542	BG069527
MCH081730	H4004F10	pSPORT1	BQ550657

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 20848] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.10.03

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl