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RIKEN DNA Bank Mouse Resource - Sox2

Gene ID NCBI Gene 20674 |  KEGG mmu:20674
Gene Symbol Sox2
Protein Name SRY (sex determining region Y)-box 2
Synonyms Sox-2|lcc|ysb
Featured content Signaling pathways regulating pluripotency of stem cells (mouse)
Featured content Hippo signaling (mouse)
Ortholog resource in our bank

  Sox2

External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB07095 pSRR2 tk-luc Oct-Sox enhancer carrying reporter derived from Sox2.
RDB08514 CSII-CMV-mSox2-IRES-Venus Lentivirus vector plasmid of mouse Sox2 with Venus fluorescent protein marker driven by CMV promoter.
RDB10779 pBR-PyCAG-Sox21318-IP Expression clone of mouse Sox2
RDB12121 pBRCMhCMV*1-Sox2-IZ Expression clone of mouse Sox2
RDB12954 CSIV-CMV-mOKS-IRES2-Venus Lentivirus vector plasmid of mouse Oct3/4, Klf4 and Sox2 with Venus fluorescent protein marker driven by CMV promoter.
RDB12956 CSII-EF-mSox2-IRES2-Venus
RDB12962 CSIV-TRE-mSox2-CMV-KT Lentivirus vector plasmid of mouse Sox2 driven by Tet-responsive promoter and hKO1-2A-rtTA driven by CMV promoter.
RDB13379 pGF-mSox2-ONL Lentiviral reporter plasmid of mouse Sox2 by the Orange Nano-lantern.

webcatalog20220516.tab

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 20674] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.11.23

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl