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RIKEN DNA Bank Mouse Resource - Six4

Gene ID (NCBI) 20474
Gene Symbol Six4
Protein Name sine oculis-related homeobox 4
Synonyms AI047561|AREC3|TrexBF
Databases KEGG link 01 |  NCBI Gene link 01
Featured content Ortholog resources in the DNA Bank (KEGG orthology K15615)


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01774 Six4 (M8 type) Plasmid clone of mouse AREC3/Six4 cDNA
RDB01775 Six4 (M18 type) Plasmid clone of mouse AREC3/Six4 cDNA
RDB01776 Six4 (SM type) Plasmid clone of mouse AREC3/Six4 cDNA
RDB02405 pAxCALNLmAREC3 (forward) Shuttle vector to produce rAd expressing mouse AREC3
RDB02406 pAxCALNLmAREC3 (reverse) Recombinant adenovirus expressing mouse AREC3
RDB02413 AxCALNLmAREC3 (forward) Recombinant adenovirus expressing mouse six4/AREC3
RDB02583 pAxCAmAREC3 (forward) Shuttle vector to produce rAd expressing mouse AREC3
RDB02584 pAxCAmAREC3 (reverse) Shuttle vector to generate rAd harboring mouse AREC3 cDNA

RDB_org_170226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH102474 H4056D02 pSPORT1 BQ559131 BQ559130  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 20474] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2017.08.22

Mus_musculus_gene_info140110 - RDB_mmu_GIxxxxxxxxx_html_170416.pl