RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Rorc

Gene ID	NCBI Gene 19885 \| KEGG mmu:19885
Gene Symbol	Rorc
Protein Name	RAR-related orphan receptor gamma
Synonyms	Nr1f3\|RORgamma\|TOR\|Thor
Featured content	Circadian clock (mouse)

Link

Ortholog resource in our bank

Rorc

External dsatabase

mouse Rorc

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB16746	pGL3-mouse RORgammat promoter (-710 to +68)	Luciferase reporter of the mouse retinoic acid-related orphan receptor gamma t (ROR gamma t) promoter (-710 to +68).

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 19885] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.10.04

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl