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RIKEN DNA Bank Mouse Resource - Rora

Gene ID NCBI Gene 19883 |  KEGG mmu:19883
Gene Symbol Rora
Protein Name RAR-related orphan receptor alpha
Synonyms 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26
Ortholog resources KEGG ortholog (KEGG orthology K08532) in the DNA Bank
Featured content Circadian clock (mouse)
Links

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  KEGG Ortholog

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH106455 H4066C07 pSPORT1 BQ560753 BQ560752  
MCH023249 H3058C01 pSPORT1 BG080861 BG067790  
MCH023677 H3059D05 pSPORT1 BG080949 BG067891  
MCH053233 H3133B09 pSPORT1 BG086983 BG074281  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 19883] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl