RIKEN DNA Bank Mouse Resource

RIKEN DNA Bank Mouse Resource - Rbpj

Gene ID	NCBI Gene 19664 \| KEGG mmu:19664
Gene Symbol	Rbpj
Protein Name	recombination signal binding protein for immunoglobulin kappa J region
Synonyms	CBF1\|Igkjrb\|Igkrsbp\|RBP-J\|RBP-J kappa\|RBP-Jkappa\|RBPjk\|Rbpsuh
Featured content	Notch signaling pathway (mouse)

Ortholog resource in our bank

Rbpj

External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number	Name of Resource	Description
RDB01801	RBP-J	Mouse RBP-Jk, RBP-2N, CBF1, KBF2 cDNA
RDB03021	pCMX-N/RBP-J	Expression vector of mouse RBP-J
RDB03022	pCMX-N/RBP-J (R218H)	Expression vector of mouse RBP-J
RDB03023	pCMX-N/VP16-RBP-J	Expression vector of mouse RBP-J
RDB08126	pEF5/FRT/V5/Rbpj	Mammalian expression vector of mouse Rbpj under the control of EF-1alpha promoter
RDB08127	pTag/HA/Rpbj	Mammalian expression vector of mouse Rbpj under the control of CMV promoter

webcatalog20220516.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence		Status
Catalog number	Clone name	Vector	5' terminal EST, submitted in DDBJ⁽¹⁾	3' terminal EST, submitted in DDBJ⁽¹⁾	Status
MCH102169	H4055H01	pSPORT1	BQ559052	BQ559051
MCH019684	H3049D12	pSPORT1	BG080087	BG067001
MCH107657	H4069C09	pSPORT1	BQ561259	BQ561258

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search	[map around Gene ID 19664] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.10.05

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl