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RIKEN DNA Bank Mouse Resource - Rab5c

Gene ID NCBI Gene 19345 |  KEGG mmu:19345
Gene Symbol Rab5c
Protein Name RAB5C, member RAS oncogene family
Synonyms Rabl
Featured content Endocytosis (mouse)
Featured content Rab Family - mouse

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Ortholog resource in our bank

  Rab5c

External dsatabase

mouse Rab5c

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB20726 pMRX-puro-mStr-Rab5C-N134I Expression vector of mouse mStrawberry-Rab5C constitutive negative mutant (N134I).    
RDB18827 pGBD-C1-Rab5C-deltaCys-N134I Expression vector of mouse Rab5C constitutive negative mutant (N134I) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.    
RDB18826 pGBD-C1-Rab5C-deltaCys-Q80L Expression vector of mouse Rab5C constitutive active mutant (Q80L) lacking a C-terminal geranylgeranylation site (delta Cys) for yeast two-hybrid assay.    
RDB17395 pGBD-C1-Rab5C-delta Cys-S35N Expression vector of constitutive negative mutants of mouse Rab5C (S35N) for yeast two-hybrid assay.    
RDB17248 pEGFP-C1-Rab5C Expression vector of mouse Rab5C fused with EGFP.    
RDB15733 pEGFP-C1-mouse Rab5C(Q80L) Expression vector of mouse Rab5C constitutive active mutant EGFP-tag.    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 19345] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2025.04.07

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl