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RIKEN DNA Bank Mouse Resource - Ptx3

Gene ID NCBI Gene 19288 |  KEGG mmu:19288
Gene Symbol Ptx3
Protein Name pentraxin related gene
Synonyms TSG-14
Ortholog resource in our bank


External dsatabase

  KEGG gene

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB13676 Ptx3 promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter.
RDB13677 Ptx3 NF kappa B-1 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at NF kappa B-1 binding site.
RDB13678 Ptx3 GRE-1 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at GRE-1.
RDB13679 Ptx3 CEBP-1 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at CEBP-1 binding site.
RDB13680 Ptx3 GRE-2 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at GRE-2.
RDB13681 Ptx3 CEBP-2 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at CEBP-2 binding site.
RDB13682 Ptx3 CEBP-3 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at CEBP-3 binding site.
RDB13683 Ptx3 NF kappa B-2 mutant promoter in pGL3-basic Reporter construct of mouse Ptx3 promoter containing mutation at NF kappa B-2 binding site.

webcatalog20220516.tab


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 19288] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2023.08.17

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl