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RIKEN DNA Bank Mouse Resource - Ptn

Gene ID NCBI Gene 19242 |  KEGG mmu:19242
Gene Symbol Ptn
Protein Name pleiotrophin
Synonyms HARP|HB-GAM|HBBM|HBBN|HBGF-8|HBNF|OSF|Osf-1|Osf1

Link

Ortholog resource in our bank

  Ptn


External dsatabase

mouse Ptn

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB02775 AxCAmOSF-1 (forward) Recombinant adenovirus harboring mouse OSF-1 (pleiotrophin) cDNA    
RDB02590 pAxCAmOSF-1 (reverse) Shuttle vector to generate rAd harboring mouse OSF-1 cDNA    
RDB02589 pAxCAmOSF-1 (forward) Shuttle vector to produce rAd expressing mouse OSF-1    
RDB01333 Mouse OSF-1 Mouse, pleiotrophin (PTN), HB-GAM, HBGF-8, HBNF, genomic DNA    
RDB01332 Mouse OSF-1 Mouse, pleiotrophin (PTN), HB-GAM, HBGF-8, HBNF, genomic DNA    
RDB01331 Mouse OSF-1 Mouse, pleiotrophin (PTN), HB-GAM, HBGF-8, HBNF, genomic DNA    
RDB01330 Mouse OSF-1 Mouse, pleiotrophin (PTN), HB-GAM, HBGF-8, HBNF, genomic DNA    
RDB01328 Mouse OSF-1 Mouse, pleiotrophin (PTN), HB-GAM, HBGF-8, HBNF, cDNA    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH049602 H3124A02 pSPORT1 BG086278 BG073550  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2024May11.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 19242] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


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2024.10.01

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl