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RIKEN DNA Bank Mouse Resource - Prnp

Gene ID (NCBI) 19122
Gene Symbol Prnp
Protein Name prion protein
Synonyms AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C
Databases KEGG mmu:19122 |  NCBI Gene 19122
Featured content Ortholog resources in the DNA Bank (KEGG orthology K05634)


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14968 PrP-EBFP E.coli expression vector, comprising full-length mouse prion protein (PrP) linked to EBFP at the C-terminus of PrP.
RDB14969 delta N-PrP-EBFB E.coli expression vector, C-terminal domain (residues 125 to 231) of mouse prion protein (PrP) linked to EBFP.

RDB_org_190226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH045332 H3113F12 pSPORT1 BG085477 BG072683  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 19122] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2019.02.26

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_180123.pl