Prev. | Mouse A to Z list > P > 

RIKEN DNA Bank Mouse Resource - Pgk1

Gene ID (NCBI) 18655
Gene Symbol Pgk1
Protein Name phosphoglycerate kinase 1
Synonyms Pgk-1
Databases KEGG link 01 |  NCBI Gene link 01
Featured content HIF-1 signaling pathway - mouse
Featured content Ortholog resources in the DNA Bank (KEGG orthology K00927)


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01324 pPGK1 EX Plasmid clone of mouse Phosphoglycerate kinase-1 (PGK-1) cDNA
RDB09790 pmPGKp-luc A control reporter plasmid under phosphoglycerate kinase (PGK-1) promoter.

RDB_org_170226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH009278 H3023D06 pSPORT1 BG078078 BG064745 done

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 18655] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2017.08.22

Mus_musculus_gene_info140110 - RDB_mmu_GIxxxxxxxxx_html_170416.pl