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RIKEN DNA Bank Mouse Resource - Pdcd1

Gene ID NCBI Gene 18566 |  KEGG mmu:18566
Gene Symbol Pdcd1
Protein Name programmed cell death 1
Synonyms Ly101|PD-1|Pdc1
Featured content T cell receptor signaling pathway (mouse)

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Ortholog resource in our bank

  Pdcd1

External dsatabase

mouse Pdcd1

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB01290 PD-1 (cDNA#7) cDNA from mouse T cell hybridoma    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 18566] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2024.10.03

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_240727.pl