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RIKEN DNA Bank Mouse Resource - Npc1

Gene ID NCBI Gene 18145 |  KEGG mmu:18145
Gene Symbol Npc1
Protein Name NPC intracellular cholesterol transporter 1
Synonyms A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm
Ortholog resources KEGG ortholog (KEGG orthology K12385) in the DNA Bank
Featured content Lysosome (mouse)

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH016828 H3042B04 pSPORT1 BG079578 BG066364  
MCH022150 H3055G06 pSPORT1 CK334573 BG067563  
MCH033231 H3083B07 pSPORT1 BG082983 BG069968  
MCH088831 H4022B07 pSPORT1 BQ553456  
MCH048972 H3122H04 pSPORT1  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 18145] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -