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RIKEN DNA Bank Mouse Resource - Myo5a

Gene ID NCBI Gene 17918 |  KEGG mmu:17918
Gene Symbol Myo5a
Protein Name myosin VA
Synonyms 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr
Ortholog resources KEGG ortholog (KEGG orthology K10357) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14185 pEGFP-MyosinVa_Full Expression vector of GFP-tagged mouse full-length myosin-Va.
RDB14186 pEGFP-MyosinVa_BRST Expression vector of GFP-tagged mouse myosin-Va tail domains of brain-specific isoform.
RDB14187 pEGFP-MyosinVa_BRSTK Expression vector of GFP-tagged mouse myosin-Va tail domains of brain-specific isoform.
RDB14188 pEGFP-MyosinVa_GTD Expression vector of GFP-tagged mouse myosin-Va tail domains of brain-specific isoform.
RDB15283 pEF-FLAG-mouse myosin Va (Brain type) Expression vector of mouse brain-type myosin Va (Myo5a).
RDB15284 pEF-FLAG-mouse myosin Va BR-tail (Brain type) Expression vector of mouse brain-type myosin Va tail region (+ exon B, - exon D and F).
RDB15285 pEF-FLAG-mouse myosin Va MC-tail (Melanocyte type) Expression vector of mouse melanocyte-type myosin Va tail region (- exon B, + exon D and F).

RDB_org_190226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH046577 H3116H09 pSPORT1 BG085739 BG072955  
MCH105331 H4063F11 pSPORT1 BQ560335 BQ560334  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 17918] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2019.10.31

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_190501.pl